What is a payment processor and how does it work?

A payment processor is an intermediary party that facilitates card and electronic payments between two parties. It enables communication between financial institutions, like banks and credit card networks, to let your businesses accept digital payments.

You need a payment processor to start taking payments for a business.

Payment processors help businesses facilitate credit card, debit card, Automated Clearing House (ACH), and other payments. But they’re more than they appear; payment processors can also help your business grow and open your sales potential to new markets.

Read on to find out more about how they work and what features to look out for.

Table of contents

  • How do payment processors work?
  • Why are payment processors important?
  • What is a payment gateway vs. payment processor?
  • How much does payment processing cost?
  • How to choose a payment processor
  • Make payment processing easier with PayPal
  • Frequently asked questions

How do payment processors work?

Payment processors work by taking the payment information customers input online or in-store and sending it between banks, credit card networks, and the business. Financial institutions verify the information and authorize the transaction, and then the payment processor finalizes the payment.

1. The customer initiates a payment

Customers add items to their cart, or employees ring them up in-store. While checking out, customers provide their card or payment information and add it to the system.

2. The payment gateway encrypts the data

The payment gateway securely connects your website’s checkout page, where the customer enters their payment information, to the payment processing network. It also connects to physical point-of-sale (POS) systems for in-store purchases.

3. The payment processor requests authorization

Next, the payment processor takes the information from the payment gateway and sends it to the customer’s bank or credit card account to request authorization.

While some businesses use separate vendors for their merchant account, payment gateway, and payment processor, companies like PayPal can take care of all three.

4. The issuing bank verifies the transaction

If the customer has enough funds or room on their credit balance, the issuing bank will approve the transaction. If not, the bank will reject it. This may also happen in other circumstances, such as a fraud flag.

5. The merchant receives the approval or rejection

The payment processor communicates the issuing bank’s decision through the payment processing network, confirming at the point of sale. This process of passing transaction information across the networks is also known as clearing.

6. The transaction is submitted for settlement

At this point, the customer's financial institution has approved the transaction and begun removing the funds from the customer’s account.

7. The merchant's bank collects and settles the funds

The final stage involves funds arriving in the merchant’s bank account. The acquiring bank receives the funds and sends them to the account, minus any processing fees.

Parties involved in business payment processing

When a purchase begins, payment processors exchange information between multiple parties. These are the systems and entities involved:

Parties involved in business payment processing.

​​Customer

​Initiates payments and provides payment information

​Merchant

​The seller who receives payment

​Issuing bank

​The institution that issued a customer’s card or account

​Acquiring bank

​The institution that holds the business’s bank account and settles funds

​Payment gateway

​A service that securely transmits payment data after a customer enters it

​Payment processor

​Connects the parties in a payment system together and handles technical processing

​Credit card network

​Provides financial infrastructure to check information and authorize transactions​

Why are payment processors important?

Today's customer expects fast, low friction payments, and if a store doesn't approve their transaction or have a good mobile experience, they may look elsewhere.

With payment processing software, you can accept electronic payment methods like mobile apps, digital wallets, and buy now, pay later financing. They can also help you build an online store to reach new customers and sell to international audiences.

Depending on the service you choose, a payment processor can also:

  • Enable global reach and payment networks that help you enter new markets.
  • Help improve your authorization rates
  • Help you reduce risks of fraud and chargebacks on eligible transactions with advanced fraud solutions
  • Offer expertise and tools that help you stay in compliance and adapt to changing times

Your payment processor is in a position to be a valuable collaborator for your business. If yours isn't doing all of the above, it could be time to revisit which payment processor is right for your enterprise.

What is a payment gateway vs. payment processor?

A payment gateway is an encryption and data transmission service that sends a customer’s data from the point of sale to the next stage in the payment process. They’re important for security and privacy.

A payment processor then takes that information and facilitates communication between banks and credit card networks.

Payment gateway vs. payment processor

Payment processor

Payment gateway

Role

Facilitates communication between parties

Securely transmits account and customer data

Functions

Initiates approval requests, communicates results, and initiates settlement

Encrypts data and sends it to payment processors or networks

How much does payment processing cost?

Fees for payment processing services depend on the company you use and the fee model they select. Payment processors generally apply fees for each transaction, which can take the form of percentages, flat rates, and interchange-plus fees.

  • Percentage fees take a small percentage of the total of each transaction.
  • Flat-rate fees apply the same fee no matter the amount of the purchase.
  • Interchange-plus fees charge a standard percentage fee from the credit card networks, plus an additional flat fee.

Different fees also go to different entities in the process:

  • Interchange fees are fees that the merchant pays to the customer’s issuing bank, and depend on the type of card the customer uses.
  • Assessment fees are percentages of transactions charged by card networks. These fees cover the costs of processing transactions, and different networks may have different fees.
  • Processor fees cover the services that payment processors provide.
  • Currency exchange fees depend on the customer’s payment currency.

Fees have many variables, including your industry, the transaction and card type, networks, pricing models, and customer locations.

How to choose a payment processor

Direct payment processors are both a “set it and forget it” necessity and a revenue generator. They can assist your business with system and data integrations and enhance customer experiences by providing various electronic payment options.

Look for these capabilities when you evaluate payment processors:

1. Supports modern payment methods

Most payment processors act as card payment processors, enabling credit, debit, and ACH payments, plus the ability to process multiple currencies.

However, mobile devices and other technologies enable a variety of additional payment method options that customers might expect:

  • Digital wallets, like PayPal, let customers make fast, low friction payments without providing card details.
  • Peer-to-peer (P2P) payments allow customers to pay businesses the same way they pay their friends, as well as share purchases on a social feed.
  • Contactless payments leverage near-field communication (NFC) or QR codes so customers can tap- or scan-to-pay for in-person transactions.
  • Prepaid gift cards are easy to send to customers via email or text and let them pay with their earned rewards.
  • Dual-branded cards offer flexibility, as businesses can process these cards on whichever network is supported in their region.
  • Local payment methods let customers pay the way they know and trust.

2. Availability of buy now, pay later options

Buy now, pay later (BNPL) integration allows customers to quickly apply for an installment payment plan checkout. And since the payment processor handles the financing, you don’t have to worry about managing it.

The rising popularity of buy now, pay later transactions has made this an important payment method to offer. Payment processors that offer BNPL options can help you secure more purchases and increase the average customer purchase value.3 Most of the time, they don’t involve a hard credit check, so customers have fewer barriers to financing.

PayPal Pay Later offers several advantages that can impact a business's bottom line:

  • Helps drive conversion: Merchants see a 52% increase in PayPal Standard transactions after including a Pay Later Self- Serve marketing banner in emails.1
  • Helps increase average order value (AOV): In the U.S., PayPal Pay Later AOVs are 50% higher than standard PayPal AOVs for SMBs.2
  • May drive repeat business: For SMB merchants in the health and beauty space, ~28 % of Pay Later customers globally make repeat purchases.3

3. Ability to deliver omnichannel experiences

The right payment processor can provide consistently great experiences across mobile, desktop, apps, and in-person, using features like:

  • Payment vaults to securely save and update payment information for quick, seamless future checkout.
  • Recurring payments for subscriptions, premiums, and more.
  • Contextual commerce to share purchasing opportunities with your customers during their discovery journeys in apps like voice assistants and chatbots. Appearing in these experiences can help you acquire and convert new customers.

4. Features system integration and customization

Payment processors should offer robust payment system integrations to make tracking, reporting, and accounting easier. Look for seamless software connections with:

  • Point-of-sale systems
  • E-commerce platforms
  • Accounting software
  • CRM platforms

This ensures all the systems communicate with each other, allowing for smoother customer experiences and reduced manual data entry tasks.

5. Prioritizes fraud protection and compliance features

Your payment processor can help mitigate losses due to security issues by:

  • Helping you mitigate fraud efficiently with embedded authentication, tokenization, 3D Secure, and PCI compliance controls
  • Using advanced machine learning that adapts to evolving fraud patterns in real time
  • Leveraging deep and unique data sets
  • Providing chargeback dispute resolution

6. Enables global scalability

A truly global payments platform provides local payment capabilities as well as support. For example, PayPal can help you to:

  • Expand to over 200 markets and allow customers to pay in 130+ currencies plus local payment methods
  • Access our network of millions of customers4
  • Leverage local banking relationships to help optimize acceptance rates
  • Contact dedicated support teams in every market we serve

Successful e-commerce operations often require you to quickly send refunds, rebates, rewards, and commissions around the world. Taking a “set it and forget it” approach gets the job done, but leading payment processors for e-commerce can help you find efficiencies and optimize your payouts.

PayPal’s payout capabilities can:

  • Help prevent expensive currency flips and foreign exchange fees thanks to funding abilities in more than 23 currencies
  • Enable payees to transfer funds in more than 23 currencies
  • Allow you to submit payment instructions using a batch transfer, easy web upload technology, or direct integration
  • Manage complex global payment regulations and compliance requirements with ease
  • Handle large payout volumes, for example, Southwest Airlines distributed $250 million to approximately 200,000 customers within six weeks using PayPal’s Hyperwallet (aka Enterprise Payouts).

7. Maintains high authorization rates

Low friction payments aren’t just about the front-end customer experience. You want strong authorization rates on the back end to help drive revenue for your business.

Processing tools like payment vaults, account updaters, and network tokenization help keep card data fresh and accurate. In turn, increased accuracy helps to drive authorization rates.

PayPal’s network processed 6.2 billion payment transactions in Q2 of 2025 alone, providing us with unique data from both customers and merchants that continues to enhance our authorization process.5

8. Reliability and uptime during high-volume periods

If payment technologies crash during times of high volume, like Black Friday or the first day of ticket sales for an event, so could your revenue. Plus, customers might not come back if they encounter errors or downtime. Your payment processor should generally have high uptime and resilience during high volume.

9. Flexibility and streamlined onboarding

A comprehensive suite of solutions shouldn’t come with complex onboarding barriers, and a global scale shouldn’t require you to have a global team to implement.

A payment processor should provide flexible solutions that won’t overwhelm your team. For example, PayPal can:

  • Flex to your tech stack and unique business needs
  • Use enterprise plug-ins to easily integrate with e-commerce platforms, billing software, CRM systems, and shopping carts
  • Allow customization with code, APIs, and SDKs designed for developers
  • Provide streamlined payment processor onboarding that allows you to turn on what you need and keep the rest in your back pocket
  • Assign you a dedicated support team to guide you through the process via live phone support and tickets

Choosing a comprehensive payment solution for your business

Payment processing makes online and in-store purchase experiences convenient for customers and efficient for your business. But a payment service should do more; download this checklist to see a full list of features that modern payment processors should offer.

PayPal powers modern global payment solutions, simplifying your payment process whether you’re a small business or a massive enterprise.

Frequently asked questions

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